Shibuya Laboratory
Division of Medical Data Informatics, Human Genome Center,
Institute of Medical Science, The University of Tokyo |
Department of Computer Science, Graduate School of Information Science
and Technology,
The University of Tokyo |
|
[Japanese] |
About This Laboratory
We are interested in algorithm design, theory and its applications for
various problems in medical science and molecular biology. The data in
the field has been increasing dramatically, especially due to development
of recent next-genration sequencers, and sophisticated algorithm design
is seriously needed. Research topics in our lab:
- Medical Data Informatics
- Indexing algorithms for various databases
- Bioinformatics Algorithms
- Algorithms for next generation sequencers (genome assembly, mapping, etc)
- Algorithms for analysing clinical/biological data (SNPs, pedigrees, phylogenies, cancer, etc)
- etc.
- AppShibuya LaboratoryliaJcations to clinical sequencing / individual medicine
- etc.
- Algorithms and Theory
- Big data algorithms
- Indexing / searching
- Sublinear algorithms
- High-performance computing
- Algorithms / Theory
- Combinatorial pattern matching
- Graph algorithms
- Data compression
- Complexity
- Privacy preserving computation
- Differential privacy
- Oblivious RAM
- Artificial intelligence / machine learning
- etc.
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Members
- Staffs
- Tetsuo Shibuya (Professor)
- Robert Daniel Barish (Assistant Professor)
- Rajaby Ramesh (JSPS Special Researcher)
- Mari Ishiguro (Technician)
- Asako Suzuki (Secretary)
- Ayako Tomiyasu (Secretary)
- Visiting Researchers
- Hiroshi Imai
- Arda Akdemir
- Students
- Akito Yamamoto (D2)
- Yaswita Gujju (D2)
- Wang Yiyan (D1)
- Hyeonho Lee (M2)
- Satoshi Hirooka (M2)
- Shota Kizawa (M1)
- Masahiro Tsukahara (B4)
- Ryosuke Yamano (B4)
- Alumni
News
Please see Lab News for details including past news.
To be a Member of Our Laboratory
We welcome anyone who are willing to do research with us as a master course
student or a ph.D. candidate. To enroll into the master/ph.D course, you
need to take the entrance examination of the Department of Computer Science, Graduate School of Information Science and Technology, University of Tokyo. Please feel free to contact/visit us before applying for the exam.
Contact
- Address
- Division of Medical Data Informatics, Human Genome Center, University of
Tokyo, 4-6-1, Shirokanedai, Minato-ku, Tokyo 108-8639, JAPAN.
- Location (Our office is located at the 4th floor of the building of the Human Genome
center (#13 in the campus map). Call ext. 75791 at the entrance)
- Phone: +81-3-5449-5791 (Professor) / +81-3-5449-5615(Secretary) / +81-3-5449-5793
(Student Room)
- E-mail: shibuyalab-jimu (domain: @hgc.jp) (Secretary)
- Fax: +81-3-5449-5790
Copyright (c) 2008- Shibuya Lab.. All rights reserved.